Description
SEC22 vesicle trafficking protein homolog C (S. cerevisiae)
Synonyms
MGC13261, MGC5373
Location
Chromosome 3: 42,547,969-42,601,080 reverse strand.
VEGA68:CM000665.2
About this gene
This gene has 16 transcripts (splice variants), 3 orthologues and 2 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SEC22C-001 | OTTHUMT00000254733.1 | 1608 | 250aa | OTTHUMP00000162608 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS2699 | A0A024R2Q1 | |
| SEC22C-005 | OTTHUMT00000343421.1 | 1513 | 250aa | OTTHUMP00000209410 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS2699 | A0A024R2Q1 | |
| SEC22C-004 | OTTHUMT00000343420.1 | 1458 | 228aa | OTTHUMP00000209409 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS56246 | - | |
| SEC22C-002 | OTTHUMT00000254734.1 | 1380 | 303aa | OTTHUMP00000162609 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS2700 | A0A024R2N5 | |
| SEC22C-003 | OTTHUMT00000343419.1 | 5955 | 225aa | OTTHUMP00000209408 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H7C479 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SEC22C-008 | OTTHUMT00000343424.2 | 872 | 236aa | OTTHUMP00000209412 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9J448 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SEC22C-010 | OTTHUMT00000343426.2 | 721 | 142aa | OTTHUMP00000209414 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9J2R1 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SEC22C-015 | OTTHUMT00000343431.2 | 553 | 75aa | OTTHUMP00000209418 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SEC22C-013 | OTTHUMT00000343429.2 | 527 | 107aa | OTTHUMP00000209417 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9J9A4 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SEC22C-006 | OTTHUMT00000343422.1 | 1446 | 143aa | OTTHUMP00000209411 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SEC22C-011 | OTTHUMT00000343427.1 | 823 | 72aa | OTTHUMP00000209415 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F8VQT7 | |
| SEC22C-012 | OTTHUMT00000343428.1 | 780 | 61aa | OTTHUMP00000209416 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SEC22C-009 | OTTHUMT00000343425.1 | 752 | 72aa | OTTHUMP00000209413 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F8VQT7 | |
| SEC22C-007 | OTTHUMT00000343423.1 | 827 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SEC22C-016 | OTTHUMT00000343432.1 | 558 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SEC22C-014 | OTTHUMT00000343430.1 | 729 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
