Description
selenocysteine lyase
Synonyms
SCL
Location
Chromosome 2: 238,060,889-238,099,413 forward strand.
VEGA68:CM000664.2
About this gene
This gene has 21 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SCLY-001 | OTTHUMT00000257165.3 | 2562 | 453aa | OTTHUMP00000164474 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS2524 | A0A0A0MQU4 | |
| SCLY-006 | OTTHUMT00000328612.1 | 1918 | 241aa | OTTHUMP00000202727 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H7C3V9 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SCLY-003 | OTTHUMT00000328609.2 | 1774 | 317aa | OTTHUMP00000202726 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| SCLY-013 | OTTHUMT00000328619.1 | 807 | 151aa | OTTHUMP00000202733 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H7C280 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SCLY-020 | OTTHUMT00000328626.1 | 760 | 251aa | OTTHUMP00000202736 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H7C277 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SCLY-017 | OTTHUMT00000328623.1 | 660 | 122aa | OTTHUMP00000202734 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H7C1N7 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SCLY-011 | OTTHUMT00000328617.3 | 585 | 195aa | OTTHUMP00000202731 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H7C4A1 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| SCLY-019 | OTTHUMT00000328625.1 | 568 | 168aa | OTTHUMP00000202735 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H7C1S7 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SCLY-008 | OTTHUMT00000328614.3 | 542 | 170aa | OTTHUMP00000202728 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JNL5 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SCLY-021 | OTTHUMT00000328627.1 | 415 | 59aa | OTTHUMP00000202737 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SCLY-004 | OTTHUMT00000328610.1 | 1032 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SCLY-012 | OTTHUMT00000328618.1 | 968 | 109aa | OTTHUMP00000202732 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SCLY-010 | OTTHUMT00000328616.1 | 628 | 71aa | OTTHUMP00000202730 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SCLY-009 | OTTHUMT00000328615.1 | 548 | 73aa | OTTHUMP00000202729 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SCLY-015 | OTTHUMT00000328621.1 | 506 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SCLY-002 | OTTHUMT00000328608.1 | 5668 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SCLY-005 | OTTHUMT00000328611.1 | 3800 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SCLY-016 | OTTHUMT00000328622.1 | 1038 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SCLY-018 | OTTHUMT00000328624.1 | 916 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SCLY-014 | OTTHUMT00000328620.1 | 770 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SCLY-007 | OTTHUMT00000328613.1 | 458 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
