Description
integrator complex subunit 9
Synonyms
CPSF2L, FLJ10871, RC-74
Location
Chromosome 8: 28,767,661-28,890,242 reverse strand.
VEGA68:CM000670.2
About this gene
This gene has 20 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| INTS9-002 | OTTHUMT00000376847.1 | 2759 | 637aa | OTTHUMP00000225631 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS55216 | - | |
| INTS9-001 | OTTHUMT00000376846.1 | 2544 | 658aa | OTTHUMP00000225630 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS34873 | Q9NV88 | |
| INTS9-004 | OTTHUMT00000376848.1 | 2430 | 634aa | OTTHUMP00000225632 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS55215 | - | |
| INTS9-010 | OTTHUMT00000376858.1 | 929 | 300aa | OTTHUMP00000225635 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E5RG70 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| INTS9-018 | OTTHUMT00000376849.1 | 686 | 150aa | OTTHUMP00000225633 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YBK3 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| INTS9-020 | OTTHUMT00000376860.2 | 668 | 223aa | OTTHUMP00000225637 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YBH8 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| INTS9-008 | OTTHUMT00000376863.2 | 559 | 87aa | OTTHUMP00000225639 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E5RJ88 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| INTS9-003 | OTTHUMT00000376851.1 | 1700 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| INTS9-007 | OTTHUMT00000376845.1 | 2578 | 525aa | OTTHUMP00000225629 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | G3XAN1 | |
| INTS9-005 | OTTHUMT00000376850.1 | 2045 | 38aa | OTTHUMP00000225634 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| INTS9-011 | OTTHUMT00000376859.1 | 756 | 170aa | OTTHUMP00000225636 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E5RK47 | |
| INTS9-012 | OTTHUMT00000376862.1 | 416 | 25aa | OTTHUMP00000225638 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| INTS9-014 | OTTHUMT00000376855.1 | 682 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| INTS9-016 | OTTHUMT00000376853.1 | 578 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| INTS9-006 | OTTHUMT00000376857.1 | 1154 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| INTS9-013 | OTTHUMT00000376856.1 | 718 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| INTS9-017 | OTTHUMT00000376852.1 | 692 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| INTS9-015 | OTTHUMT00000376854.1 | 588 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| INTS9-009 | OTTHUMT00000376864.1 | 498 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| INTS9-019 | OTTHUMT00000376861.1 | 314 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
