Description
rabaptin, RAB GTPase binding effector protein 2
Synonyms
FRA, FLJ23282
Location
Chromosome 16: 28,904,421-28,936,526 reverse strand.
VEGA68:CM000678.2
About this gene
This gene has 16 transcripts (splice variants), 2 orthologues and 1 paralogue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| RABEP2-001 | OTTHUMT00000432691.1 | 2821 | 569aa | OTTHUMP00000254577 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS42140 | Q9H5N1 | |
| RABEP2-006 | OTTHUMT00000432690.1 | 2175 | 533aa | OTTHUMP00000254576 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| RABEP2-002 | OTTHUMT00000432692.1 | 1645 | 498aa | OTTHUMP00000254578 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B4DHR0 | |
| RABEP2-009 | OTTHUMT00000432695.1 | 1045 | 245aa | OTTHUMP00000254580 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BNR2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| RABEP2-007 | OTTHUMT00000432696.2 | 841 | 280aa | OTTHUMP00000254581 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BT64 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| RABEP2-015 | OTTHUMT00000432698.2 | 545 | 44aa | OTTHUMP00000254583 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BNR8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| RABEP2-008 | OTTHUMT00000432697.2 | 538 | 72aa | OTTHUMP00000254582 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BU67 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| RABEP2-004 | OTTHUMT00000432702.1 | 2008 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| RABEP2-003 | OTTHUMT00000432706.1 | 1146 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| RABEP2-012 | OTTHUMT00000432705.1 | 589 | 47aa | OTTHUMP00000254584 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H3BMR7 | |
| RABEP2-016 | OTTHUMT00000432699.1 | 593 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| RABEP2-011 | OTTHUMT00000432701.1 | 560 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| RABEP2-010 | OTTHUMT00000432700.1 | 553 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| RABEP2-005 | OTTHUMT00000432694.1 | 2211 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| RABEP2-014 | OTTHUMT00000432703.1 | 583 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| RABEP2-013 | OTTHUMT00000432704.1 | 557 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
