Description
sperm antigen with calponin homology and coiled-coil domains 1
Synonyms
HCMOGT-1, FLJ36955, CYTSB, NSP
Location
Chromosome 17: 20,009,344-20,319,026 forward strand.
VEGA68:CM000679.2
About this gene
This gene has 23 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SPECC1-004 | OTTHUMT00000132368.3 | 8133 | 987aa | OTTHUMP00000065845 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS42281 | - | |
| SPECC1-002 | OTTHUMT00000132366.2 | 4971 | 790aa | OTTHUMP00000065843 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS42280 | - | |
| SPECC1-018 | OTTHUMT00000441206.1 | 3948 | 1068aa | OTTHUMP00000258958 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS32590 | Q5M775 | |
| SPECC1-027 | OTTHUMT00000442502.1 | 3363 | 1068aa | OTTHUMP00000259676 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS32590 | Q5M775 | |
| SPECC1-003 | OTTHUMT00000132367.4 | 2982 | 703aa | OTTHUMP00000260186 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS58531 | - | |
| SPECC1-026 | OTTHUMT00000442505.1 | 2536 | 709aa | OTTHUMP00000259679 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS45628 | - | |
| SPECC1-001 | OTTHUMT00000132365.2 | 2249 | 534aa | OTTHUMP00000065842 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SPECC1-028 | OTTHUMT00000448284.1 | 940 | 202aa | OTTHUMP00000262456 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| SPECC1-029 | OTTHUMT00000448283.1 | 732 | 167aa | OTTHUMP00000262455 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SPECC1-016 | OTTHUMT00000441207.3 | 674 | 102aa | OTTHUMP00000258959 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SPECC1-015 | OTTHUMT00000441205.3 | 662 | 21aa | OTTHUMP00000258957 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SPECC1-020 | OTTHUMT00000441203.2 | 581 | 132aa | OTTHUMP00000258955 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SPECC1-024 | OTTHUMT00000442504.2 | 571 | 78aa | OTTHUMP00000259678 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SPECC1-025 | OTTHUMT00000442503.3 | 570 | 101aa | OTTHUMP00000259677 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SPECC1-017 | OTTHUMT00000441208.2 | 462 | 73aa | OTTHUMP00000258960 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SPECC1-014 | OTTHUMT00000441204.3 | 433 | 19aa | OTTHUMP00000258956 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SPECC1-021 | OTTHUMT00000442506.1 | 195 | 46aa | OTTHUMP00000259680 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SPECC1-008 | OTTHUMT00000132372.3 | 731 | 25aa | OTTHUMP00000260185 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SPECC1-006 | OTTHUMT00000132370.1 | 614 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SPECC1-012 | OTTHUMT00000441209.1 | 580 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SPECC1-007 | OTTHUMT00000132371.2 | 574 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SPECC1-010 | OTTHUMT00000441210.1 | 461 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SPECC1-005 | OTTHUMT00000132369.2 | 1190 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
