Description
GH3 domain containing
Synonyms
LGP1
Location
Chromosome 17: 42,188,799-42,194,513 reverse strand.
VEGA68:CM000679.2
About this gene
This gene has 12 transcripts (splice variants) and 2 orthologues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| GHDC-006 | OTTHUMT00000449794.1 | 2650 | 530aa | OTTHUMP00000263358 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS11422 | Q8N2G8 | |
| GHDC-002 | OTTHUMT00000449796.1 | 2496 | 474aa | OTTHUMP00000263359 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS45682 | - | |
| GHDC-001 | OTTHUMT00000449797.1 | 2396 | 530aa | OTTHUMP00000263360 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS11422 | Q8N2G8 | |
| GHDC-005 | OTTHUMT00000449793.1 | 1827 | 479aa | OTTHUMP00000263357 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| GHDC-007 | OTTHUMT00000449800.2 | 561 | 146aa | OTTHUMP00000263362 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| GHDC-008 | OTTHUMT00000449801.2 | 559 | 130aa | OTTHUMP00000263363 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| GHDC-004 | OTTHUMT00000449795.1 | 2213 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| GHDC-003 | OTTHUMT00000449799.1 | 842 | 112aa | OTTHUMP00000263361 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| GHDC-009 | OTTHUMT00000449803.1 | 585 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| GHDC-011 | OTTHUMT00000449802.1 | 542 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| GHDC-012 | OTTHUMT00000449798.1 | 940 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| GHDC-010 | OTTHUMT00000449804.1 | 592 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
