This is an archived version of Vega. Click here for more information.

Human

Loading…

Help & Documentation

Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
Gene expression
External references
Supporting evidence
Other genome browsers
- Ensembl

Configure this page

Share this page

Bookmark this page

.

Gene: HSBP1L1 OTTHUMG00000180375

.

Description

heat shock factor binding protein 1-like 1

Synonyms

MGC189743, FLJ10967

Location

Chromosome 18: 79,964,561-79,970,822 forward strand.

VEGA68:CM000680.2

About this gene

This gene has 6 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
HSBP1L1-001	OTTHUMT00000451030.1	771	74aa	OTTHUMP00000264134	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS45886	C9JCN9
HSBP1L1-002	OTTHUMT00000451033.1	662	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
HSBP1L1-006	OTTHUMT00000451032.1	800	45aa	OTTHUMP00000264135	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	K7ENV5
HSBP1L1-003	OTTHUMT00000451034.1	1057	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
HSBP1L1-004	OTTHUMT00000451035.1	775	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
HSBP1L1-005	OTTHUMT00000451031.1	564	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

.

Summary

.

.

Gene-based displays