Description
CWC25 spliceosome-associated protein homolog (S. cerevisiae)
Synonyms
FLJ20291
Location
Chromosome 17: 38,800,434-38,825,481 reverse strand.
VEGA68:CM000679.2
About this gene
This gene has 8 transcripts (splice variants), 2 orthologues and 1 paralogue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| CWC25-001 | OTTHUMT00000477464.1 | 3234 | 425aa | OTTHUMP00000276735 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS45663 | Q9NXE8 | |
| CWC25-008 | OTTHUMT00000477465.1 | 2270 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| CWC25-003 | OTTHUMT00000477466.1 | 1894 | 68aa | OTTHUMP00000276736 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| CWC25-004 | OTTHUMT00000477467.1 | 1160 | 3aa | OTTHUMP00000276737 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| CWC25-006 | OTTHUMT00000477471.1 | 976 | 68aa | OTTHUMP00000276739 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| CWC25-009 | OTTHUMT00000477468.1 | 650 | 59aa | OTTHUMP00000276738 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| CWC25-002 | OTTHUMT00000477470.1 | 1127 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CWC25-007 | OTTHUMT00000477469.1 | 581 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
