This is an archived version of Vega. Click here for more information.

Human

Loading…

Help & Documentation

Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
Gene expression
External references
Supporting evidence
Other genome browsers
- Ensembl

Configure this page

Share this page

Bookmark this page

.

Gene: RALY OTTHUMG00000032283

.

Description

RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))

Synonyms

P542, HNRPCL2

Location

Chromosome 20: 33,993,646-34,108,308 forward strand.

VEGA68:CM000682.2

About this gene

This gene has 10 transcripts (splice variants), 9 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
RALY-001	OTTHUMT00000078752.2	6430	290aa	OTTHUMP00000030673	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS13229	-
RALY-002	OTTHUMT00000078753.2	1789	306aa	OTTHUMP00000030674	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS13230	Q9UKM9
RALY-004	OTTHUMT00000078755.2	1204	181aa	OTTHUMP00000030676	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q5QPM1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
RALY-007	OTTHUMT00000078758.2	871	237aa	OTTHUMP00000030678	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q5QPL9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
RALY-005	OTTHUMT00000078756.2	786	171aa	OTTHUMP00000030677	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
RALY-003	OTTHUMT00000078754.2	766	89aa	OTTHUMP00000030675	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q5QPM2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
RALY-006	OTTHUMT00000078757.1	513	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
RALY-009	OTTHUMT00000078760.1	430	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
RALY-008	OTTHUMT00000078759.1	227	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
RALY-010	OTTHUMT00000078761.1	773	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

.

Summary

.

.

Gene-based displays