Description
serine hydroxymethyltransferase 1 (soluble)
Synonyms
SHMT, MGC15229, CSHMT, MGC24556
Location
Chromosome 17: 18,327,873-18,363,542 reverse strand.
VEGA68:CM000679.2
About this gene
This gene has 9 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SHMT1-001 | OTTHUMT00000130831.2 | 2464 | 483aa | OTTHUMP00000065139 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS11196 | P34896 | |
| SHMT1-003 | OTTHUMT00000130833.1 | 1656 | 444aa | OTTHUMP00000065141 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS11197 | - | |
| SHMT1-009 | OTTHUMT00000446320.2 | 879 | 167aa | OTTHUMP00000261410 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | J3KRZ5 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SHMT1-007 | OTTHUMT00000446321.3 | 332 | 1aa | OTTHUMP00000262576 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SHMT1-006 | OTTHUMT00000446318.1 | 1759 | 128aa | OTTHUMP00000261408 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | J3KRK5 | |
| SHMT1-010 | OTTHUMT00000447152.1 | 2756 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SHMT1-004 | OTTHUMT00000130834.1 | 2652 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SHMT1-008 | OTTHUMT00000446319.2 | 1077 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SHMT1-005 | OTTHUMT00000130835.1 | 570 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
