Description
COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)
Synonyms
SGN3, CSN3
Location
Chromosome 17: 17,246,820-17,281,293 reverse strand.
VEGA68:CM000679.2
About this gene
This gene has 18 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| COPS3-014 | OTTHUMT00000445189.2 | 1699 | 403aa | OTTHUMP00000260872 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS56022 | - | |
| COPS3-001 | OTTHUMT00000131603.2 | 1641 | 423aa | OTTHUMP00000065517 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS11183 | Q9UNS2 | |
| COPS3-002 | OTTHUMT00000131604.3 | 1394 | 345aa | OTTHUMP00000065518 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H7C3P9 | |
| COPS3-008 | OTTHUMT00000131610.2 | 1009 | 318aa | OTTHUMP00000065519 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JLV5 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| COPS3-020 | OTTHUMT00000446044.2 | 419 | 51aa | OTTHUMP00000263927 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| COPS3-018 | OTTHUMT00000445193.2 | 365 | 122aa | OTTHUMP00000263928 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| COPS3-013 | OTTHUMT00000445190.1 | 1625 | 31aa | OTTHUMP00000260873 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| COPS3-016 | OTTHUMT00000445192.1 | 876 | 107aa | OTTHUMP00000260875 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| COPS3-007 | OTTHUMT00000131609.2 | 809 | 31aa | OTTHUMP00000260876 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| COPS3-019 | OTTHUMT00000445191.1 | 752 | 20aa | OTTHUMP00000260874 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| COPS3-006 | OTTHUMT00000131608.2 | 656 | 116aa | OTTHUMP00000260877 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| COPS3-015 | OTTHUMT00000445194.1 | 639 | 20aa | OTTHUMP00000260878 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| COPS3-005 | OTTHUMT00000131607.2 | 333 | 17aa | OTTHUMP00000263929 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| COPS3-004 | OTTHUMT00000131606.1 | 938 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| COPS3-011 | OTTHUMT00000131613.1 | 725 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| COPS3-003 | OTTHUMT00000131605.1 | 551 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| COPS3-009 | OTTHUMT00000131611.1 | 455 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| COPS3-010 | OTTHUMT00000131612.1 | 288 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
