Description
interferon regulatory factor 1
Synonyms
MAR
Location
Chromosome 5: 132,481,609-132,490,798 reverse strand.
VEGA68:CM000667.2
About this gene
This gene has 10 transcripts (splice variants), 8 orthologues and 6 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| IRF1-001 | OTTHUMT00000132340.1 | 3579 | 325aa | OTTHUMP00000065831 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS4155 | Q6FHN8 | |
| IRF1-008 | OTTHUMT00000319641.2 | 2061 | 325aa | OTTHUMP00000198266 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS4155 | Q6FHN8 | |
| IRF1-010 | OTTHUMT00000322199.2 | 885 | 192aa | OTTHUMP00000199798 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JD95 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| IRF1-002 | OTTHUMT00000132341.13 | 832 | 198aa | OTTHUMP00000065832 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9J9C5 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| IRF1-007 | OTTHUMT00000315756.3 | 523 | 118aa | OTTHUMP00000272309 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | R4GNI0 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| IRF1-009 | OTTHUMT00000319642.2 | 524 | 51aa | OTTHUMP00000198267 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F8WCM1 | |
| IRF1-003 | OTTHUMT00000132342.1 | 520 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| IRF1-006 | OTTHUMT00000148098.2 | 5153 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| IRF1-004 | OTTHUMT00000132343.1 | 1231 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| IRF1-005 | OTTHUMT00000132344.1 | 1023 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
