Description
solute carrier family 1 (glial high affinity glutamate transporter), member 3
Synonyms
GLAST, EA6, EAAT1
Location
Chromosome 5: 36,606,355-36,688,334 forward strand.
VEGA68:CM000667.2
About this gene
This gene has 16 transcripts (splice variants), 5 orthologues and 3 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SLC1A3-001 | OTTHUMT00000207579.2 | 4170 | 542aa | OTTHUMP00000116002 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS3919 | P43003 | |
| SLC1A3-007 | OTTHUMT00000366894.2 | 784 | 101aa | OTTHUMP00000221087 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7EUS7 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SLC1A3-011 | OTTHUMT00000366898.1 | 566 | 106aa | OTTHUMP00000221090 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7EUV6 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SLC1A3-010 | OTTHUMT00000366897.2 | 540 | 106aa | OTTHUMP00000221089 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7EUV6 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SLC1A3-004 | OTTHUMT00000366891.1 | 1998 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SLC1A3-002 | OTTHUMT00000366889.1 | 1778 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SLC1A3-006 | OTTHUMT00000366893.1 | 1778 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SLC1A3-005 | OTTHUMT00000366892.1 | 1137 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SLC1A3-015 | OTTHUMT00000366902.1 | 567 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SLC1A3-009 | OTTHUMT00000366896.1 | 558 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SLC1A3-013 | OTTHUMT00000366900.1 | 545 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SLC1A3-012 | OTTHUMT00000366899.1 | 540 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SLC1A3-014 | OTTHUMT00000366901.1 | 414 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SLC1A3-003 | OTTHUMT00000366890.1 | 1096 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SLC1A3-008 | OTTHUMT00000366895.1 | 583 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SLC1A3-017 | OTTHUMT00000366903.1 | 547 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
