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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
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- Orthologues
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Gene: GALNT1 OTTHUMG00000132567

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Description

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)

Synonyms

GalNAc-T1

Location

Chromosome 18: 35,581,117-35,711,834 forward strand.

VEGA68:CM000680.2

About this gene

This gene has 6 transcripts (splice variants) and 2 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
GALNT1-001	OTTHUMT00000255771.2	3847	559aa	OTTHUMP00000163385	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS11915	A0A024RC48
GALNT1-002	OTTHUMT00000443209.1	1120	105aa	OTTHUMP00000259980	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
GALNT1-006	OTTHUMT00000444187.2	542	105aa	OTTHUMP00000260428	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
GALNT1-004	OTTHUMT00000443208.2	2346	387aa	OTTHUMP00000259979	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	K7EJV8
GALNT1-003	OTTHUMT00000443210.1	1770	50aa	OTTHUMP00000259981	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	K7EK46
GALNT1-005	OTTHUMT00000443207.1	272	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

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Summary

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