Description
TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa
Synonyms
MGC5306, TAF(I)41
Location
Chromosome 11: 93,729,948-93,784,391 reverse strand.
VEGA68:CM000673.2
About this gene
This gene has 22 transcripts (splice variants).
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
TAF1D-001 | OTTHUMT00000394662.2 | 2082 | 278aa | OTTHUMP00000235965 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS8293 | A0A024R3A9 | |
TAF1D-007 | OTTHUMT00000394667.1 | 565 | 110aa | OTTHUMP00000235969 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
TAF1D-024 | OTTHUMT00000394790.3 | 335 | 8aa | OTTHUMP00000236035 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
TAF1D-002 | OTTHUMT00000394649.2 | 2540 | 278aa | OTTHUMP00000235963 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | CCDS8293 | A0A024R3A9 | |
TAF1D-004 | OTTHUMT00000394647.1 | 1735 | 278aa | OTTHUMP00000235962 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | CCDS8293 | A0A024R3A9 | |
TAF1D-003 | OTTHUMT00000394657.1 | 1127 | 215aa | OTTHUMP00000235964 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E9PM59 | |
TAF1D-008 | OTTHUMT00000394665.1 | 737 | 36aa | OTTHUMP00000235967 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
TAF1D-014 | OTTHUMT00000394651.2 | 547 | 44aa | OTTHUMP00000240701 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
TAF1D-013 | OTTHUMT00000394659.2 | 505 | 26aa | OTTHUMP00000240703 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
TAF1D-023 | OTTHUMT00000394789.2 | 483 | 42aa | OTTHUMP00000240702 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
TAF1D-015 | OTTHUMT00000394650.1 | 1728 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
TAF1D-019 | OTTHUMT00000394658.1 | 1429 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
TAF1D-009 | OTTHUMT00000394666.2 | 334 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
TAF1D-005 | OTTHUMT00000394652.1 | 4358 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
TAF1D-020 | OTTHUMT00000394653.1 | 1710 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
TAF1D-011 | OTTHUMT00000394660.1 | 1123 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
TAF1D-022 | OTTHUMT00000394655.1 | 1066 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
TAF1D-010 | OTTHUMT00000394664.2 | 1023 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
TAF1D-016 | OTTHUMT00000394654.1 | 1011 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
TAF1D-017 | OTTHUMT00000394663.1 | 664 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
TAF1D-021 | OTTHUMT00000394648.1 | 656 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
TAF1D-006 | OTTHUMT00000394668.1 | 538 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |