Description
tumor necrosis factor receptor superfamily, member 1A
Synonyms
TNFR60, TNFAR, TNF-R55, CD120a, TNF-R, TNF-R-I
Location
Chromosome 12: 6,328,757-6,342,114 reverse strand.
VEGA68:CM000674.2
About this gene
This gene has 17 transcripts (splice variants) and 2 orthologues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| TNFRSF1A-001 | OTTHUMT00000399038.1 | 2223 | 455aa | OTTHUMP00000238438 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS8542 | P19438 | |
| TNFRSF1A-002 | OTTHUMT00000399041.1 | 1527 | 412aa | OTTHUMP00000238440 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F5H061 | |
| TNFRSF1A-004 | OTTHUMT00000399046.1 | 1339 | 218aa | OTTHUMP00000238442 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| TNFRSF1A-014 | OTTHUMT00000399045.2 | 1063 | 298aa | OTTHUMP00000238441 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F5H8A6 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| TNFRSF1A-013 | OTTHUMT00000399049.2 | 1034 | 254aa | OTTHUMP00000238444 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F5H6V7 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| TNFRSF1A-010 | OTTHUMT00000399050.2 | 581 | 118aa | OTTHUMP00000238445 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F5H6Z2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| TNFRSF1A-017 | OTTHUMT00000399418.2 | 1926 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| TNFRSF1A-003 | OTTHUMT00000399037.1 | 2069 | 122aa | OTTHUMP00000238437 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| TNFRSF1A-005 | OTTHUMT00000399040.1 | 1531 | 72aa | OTTHUMP00000238439 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F5H7N1 | |
| TNFRSF1A-011 | OTTHUMT00000399048.1 | 571 | 71aa | OTTHUMP00000238443 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F5H4T5 | |
| TNFRSF1A-012 | OTTHUMT00000399047.1 | 634 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| TNFRSF1A-015 | OTTHUMT00000399042.1 | 627 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| TNFRSF1A-007 | OTTHUMT00000399044.1 | 578 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| TNFRSF1A-009 | OTTHUMT00000399051.1 | 568 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| TNFRSF1A-008 | OTTHUMT00000399052.1 | 554 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| TNFRSF1A-016 | OTTHUMT00000399043.1 | 404 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| TNFRSF1A-006 | OTTHUMT00000399039.1 | 1503 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
