Description
REX2, RNA exonuclease 2 homolog (S. cerevisiae)
Synonyms
DKFZP566E144, CGI-114, SFN
Location
Chromosome 11: 114,439,386-114,450,279 forward strand.
VEGA68:CM000673.2
About this gene
This gene has 20 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| REXO2-001 | OTTHUMT00000399087.1 | 1161 | 237aa | OTTHUMP00000238466 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS8371 | Q9Y3B8 | |
| REXO2-014 | OTTHUMT00000399100.2 | 880 | 188aa | OTTHUMP00000238474 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YG54 | |
| REXO2-007 | OTTHUMT00000399090.1 | 791 | 222aa | OTTHUMP00000238468 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F5GYG5 | |
| REXO2-003 | OTTHUMT00000399092.1 | 710 | 79aa | OTTHUMP00000238469 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | Q9BTR4 | |
| REXO2-012 | OTTHUMT00000399098.1 | 664 | 192aa | OTTHUMP00000238473 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YGR4 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| REXO2-006 | OTTHUMT00000399089.1 | 452 | 85aa | OTTHUMP00000238467 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F5H6P8 | |
| REXO2-002 | OTTHUMT00000399091.1 | 845 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| REXO2-015 | OTTHUMT00000399101.1 | 726 | 67aa | OTTHUMP00000238475 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H0YF66 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| REXO2-011 | OTTHUMT00000399096.1 | 539 | 67aa | OTTHUMP00000238471 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| REXO2-010 | OTTHUMT00000399095.1 | 475 | 121aa | OTTHUMP00000238470 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F5H784 | |
| REXO2-019 | OTTHUMT00000399097.1 | 449 | 90aa | OTTHUMP00000238472 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H0YG37 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| REXO2-017 | OTTHUMT00000399103.1 | 753 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| REXO2-018 | OTTHUMT00000399106.1 | 641 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| REXO2-020 | OTTHUMT00000399102.1 | 626 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| REXO2-004 | OTTHUMT00000399105.1 | 1088 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| REXO2-016 | OTTHUMT00000399104.1 | 1081 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| REXO2-005 | OTTHUMT00000399088.1 | 848 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| REXO2-008 | OTTHUMT00000399093.1 | 651 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| REXO2-009 | OTTHUMT00000399094.1 | 552 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| REXO2-013 | OTTHUMT00000399099.1 | 463 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
