Description
high mobility group AT-hook 2
Synonyms
LIPO, BABL
Location
Chromosome 12: 65,823,657-65,966,295 forward strand.
VEGA68:CM000674.2
About this gene
This gene has 13 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| HMGA2-001 | OTTHUMT00000401654.1 | 4473 | 109aa | OTTHUMP00000239770 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44936 | P52926 | |
| HMGA2-005 | OTTHUMT00000401656.2 | 1993 | 90aa | OTTHUMP00000239772 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS81709 | - | |
| HMGA2-003 | OTTHUMT00000401659.1 | 1788 | 147aa | OTTHUMP00000239775 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS73491 | F5H6H0 | |
| HMGA2-008 | OTTHUMT00000401660.1 | 1529 | 106aa | OTTHUMP00000239776 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS31854 | - | |
| HMGA2-013 | OTTHUMT00000401663.1 | 611 | 118aa | OTTHUMP00000239778 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS73492 | F5H2A4 | |
| HMGA2-011 | OTTHUMT00000401662.1 | 8094 | 99aa | OTTHUMP00000239777 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F5H2U8 | |
| HMGA2-006 | OTTHUMT00000401658.1 | 1444 | 92aa | OTTHUMP00000239774 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| HMGA2-002 | OTTHUMT00000401653.1 | 751 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| HMGA2-010 | OTTHUMT00000401664.1 | 295 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| HMGA2-007 | OTTHUMT00000401657.1 | 1527 | 86aa | OTTHUMP00000239773 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| HMGA2-004 | OTTHUMT00000401655.1 | 1508 | 103aa | OTTHUMP00000239771 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| HMGA2-012 | OTTHUMT00000401665.1 | 485 | 55aa | OTTHUMP00000239779 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H0YFY4 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| HMGA2-009 | OTTHUMT00000401661.1 | 1584 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
