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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
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Gene: SVOP OTTHUMG00000169432

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Description

SV2 related protein homolog (rat)

Synonyms

DKFZp761H039

Location

Chromosome 12: 108,907,741-109,021,240 reverse strand.

VEGA68:CM000674.2

About this gene

This gene has 5 transcripts (splice variants), 5 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SVOP-001	OTTHUMT00000403982.3	6813	548aa	OTTHUMP00000241061	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS73520	Q8N4V2
SVOP-003	OTTHUMT00000403985.3	639	155aa	OTTHUMP00000241063	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0YHK4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SVOP-004	OTTHUMT00000403984.2	695	104aa	OTTHUMP00000241062	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
SVOP-002	OTTHUMT00000403986.2	597	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SVOP-005	OTTHUMT00000403983.1	439	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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