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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments (2)
- Orthologues (30)
- Alt. alleles
Ontologies
Gene expression
External references
Supporting evidence
Other genome browsers
- Ensembl

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Gene: SNRNP40 OTTHUMG00000003790

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Description

small nuclear ribonucleoprotein 40kDa (U5)

Synonyms

PRP8BP, SPF38, HPRP8BP, PRPF8BP

Location

Chromosome 1: 31,259,568-31,296,782 reverse strand.

VEGA68:CM000663.2

About this gene

This gene has 7 transcripts (splice variants), 30 orthologues and 27 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SNRNP40-001	OTTHUMT00000010657.2	1597	357aa	OTTHUMP00000003888	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS340	A0MNP2
SNRNP40-002	OTTHUMT00000010658.1	1087	127aa	OTTHUMP00000003889	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q9NSS8
SNRNP40-003	OTTHUMT00000010659.1	1928	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SNRNP40-005	OTTHUMT00000010661.1	743	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SNRNP40-007	OTTHUMT00000010663.1	677	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SNRNP40-006	OTTHUMT00000010662.1	581	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SNRNP40-004	OTTHUMT00000010660.1	459	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

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Summary

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Gene-based displays