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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments (2)
- Orthologues (3)
- Alt. alleles
Ontologies
Gene expression
External references
Supporting evidence
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Gene: DEPDC1 OTTHUMG00000009212

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Description

DEP domain containing 1

Synonyms

DEP.8, FLJ20354, DEPDC1A, SDP35

Location

Chromosome 1: 68,474,152-68,497,221 reverse strand.

VEGA68:CM000663.2

About this gene

This gene has 5 transcripts (splice variants), 3 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
DEPDC1-002	OTTHUMT00000025514.2	5331	811aa	OTTHUMP00000010790	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS44159	Q5TB30
DEPDC1-001	OTTHUMT00000025513.2	4586	527aa	OTTHUMP00000010789	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS644	-
DEPDC1-004	OTTHUMT00000025516.3	582	34aa	OTTHUMP00000010791	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
DEPDC1-003	OTTHUMT00000025515.2	1613	308aa	OTTHUMP00000229471	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H0YES2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
DEPDC1-005	OTTHUMT00000025517.1	2658	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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