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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
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Gene: PDZD7 OTTHUMG00000018916

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Description

PDZ domain containing 7

Synonyms

bA108L7.8, FLJ23209

Location

Chromosome 10: 101,007,683-101,031,133 reverse strand.

VEGA68:CM000672.2

About this gene

This gene has 5 transcripts (splice variants), 3 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
PDZD7-003	OTTHUMT00000049883.1	2032	517aa	OTTHUMP00000020294	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS31269	Q9H5P4
PDZD7-001	OTTHUMT00000049881.2	1057	181aa	OTTHUMP00000272705	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
PDZD7-005	OTTHUMT00000049885.2	624	208aa	OTTHUMP00000020295	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
PDZD7-004	OTTHUMT00000049884.3	4433	133aa	OTTHUMP00000272704	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
PDZD7-002	OTTHUMT00000049882.1	1591	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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