Description
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
Synonyms
Sth1p, SWI2, BAF190, BRM, hBRM, SNF2LA, hSNF2a, SNF2
Location
Chromosome 9: 1,980,290-2,193,624 forward strand.
VEGA68:CM000671.2
About this gene
This gene has 68 transcripts (splice variants).
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
SMARCA2-003 | OTTHUMT00000051505.2 | 5867 | 1590aa | OTTHUMP00000020970 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS34977 | P51531 | |
SMARCA2-019 | OTTHUMT00000488357.2 | 5855 | 1572aa | OTTHUMP00000281407 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS34978 | - | |
SMARCA2-017 | OTTHUMT00000488355.1 | 5761 | 1590aa | OTTHUMP00000281406 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS34977 | P51531 | |
SMARCA2-004 | OTTHUMT00000051506.2 | 5679 | 1572aa | OTTHUMP00000020971 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS34978 | - | |
SMARCA2-008 | OTTHUMT00000051510.2 | 5602 | 1514aa | OTTHUMP00000020974 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS83338 | F6VDE0 | |
SMARCA2-001 | OTTHUMT00000051503.3 | 2242 | 278aa | OTTHUMP00000020968 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS75808 | B1ALF6 | |
SMARCA2-022 | OTTHUMT00000488360.1 | 1781 | 248aa | OTTHUMP00000281409 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS75807 | F6T8Q0 | |
SMARCA2-023 | OTTHUMT00000488367.1 | 1584 | 276aa | OTTHUMP00000281412 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS83339 | B4DNT1 | |
SMARCA2-012 | OTTHUMT00000051514.2 | 980 | 276aa | OTTHUMP00000020978 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS83339 | B4DNT1 | |
SMARCA2-051 | OTTHUMT00000490244.1 | 7061 | 279aa | OTTHUMP00000282596 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A1B0GWA8 | |
SMARCA2-049 | OTTHUMT00000490242.1 | 6853 | 279aa | OTTHUMP00000282594 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A1B0GWA8 | |
SMARCA2-048 | OTTHUMT00000490241.1 | 5657 | 288aa | OTTHUMP00000282593 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A1B0GU54 | |
SMARCA2-056 | OTTHUMT00000490252.2 | 2531 | 134aa | OTTHUMP00000282603 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
SMARCA2-050 | OTTHUMT00000490243.2 | 2471 | 288aa | OTTHUMP00000282595 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A1B0GU54 | |
SMARCA2-013 | OTTHUMT00000051515.2 | 1178 | 236aa | OTTHUMP00000020979 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B1ALG1 | |
SMARCA2-002 | OTTHUMT00000488345.2 | 1106 | 260aa | OTTHUMP00000281405 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0U1RR26 | |
SMARCA2-010 | OTTHUMT00000051512.2 | 955 | 254aa | OTTHUMP00000020976 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B1ALG2 | |
SMARCA2-034 | OTTHUMT00000488372.1 | 939 | 254aa | OTTHUMP00000281416 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B1ALG2 | |
SMARCA2-044 | OTTHUMT00000488383.2 | 897 | 149aa | OTTHUMP00000281426 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SMARCA2-014 | OTTHUMT00000051516.4 | 834 | 228aa | OTTHUMP00000020980 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F6XE55 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SMARCA2-032 | OTTHUMT00000488370.2 | 810 | 270aa | OTTHUMP00000281414 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0U1RRG6 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
SMARCA2-038 | OTTHUMT00000488379.2 | 792 | 231aa | OTTHUMP00000281423 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0U1RRN2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SMARCA2-033 | OTTHUMT00000488371.2 | 758 | 200aa | OTTHUMP00000281415 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0U1RQU0 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SMARCA2-005 | OTTHUMT00000051507.3 | 755 | 215aa | OTTHUMP00000020972 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0A0MT03 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SMARCA2-011 | OTTHUMT00000051513.4 | 750 | 182aa | OTTHUMP00000020977 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0A0MSS5 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SMARCA2-040 | OTTHUMT00000488378.2 | 744 | 245aa | OTTHUMP00000281422 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0U1RQX3 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SMARCA2-041 | OTTHUMT00000488376.2 | 740 | 244aa | OTTHUMP00000281420 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0U1RR83 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SMARCA2-006 | OTTHUMT00000051508.3 | 736 | 193aa | OTTHUMP00000020973 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F6RS74 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SMARCA2-042 | OTTHUMT00000488373.2 | 712 | 229aa | OTTHUMP00000281417 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0U1RQW7 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SMARCA2-035 | OTTHUMT00000488374.2 | 711 | 202aa | OTTHUMP00000281418 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0U1RR09 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SMARCA2-030 | OTTHUMT00000488366.2 | 683 | 228aa | OTTHUMP00000281411 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0U1RQE1 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
SMARCA2-027 | OTTHUMT00000488362.1 | 640 | 57aa | OTTHUMP00000281410 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
SMARCA2-015 | OTTHUMT00000051517.3 | 633 | 192aa | OTTHUMP00000020981 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F6UH26 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SMARCA2-036 | OTTHUMT00000488375.2 | 630 | 169aa | OTTHUMP00000281419 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SMARCA2-037 | OTTHUMT00000488377.3 | 616 | 68aa | OTTHUMP00000281421 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0U1RRJ4 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SMARCA2-047 | OTTHUMT00000488381.2 | 424 | 62aa | OTTHUMP00000281425 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0U1RQS1 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SMARCA2-057 | OTTHUMT00000490247.1 | 162 | 9aa | OTTHUMP00000282598 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SMARCA2-058 | OTTHUMT00000490248.1 | 128 | 6aa | OTTHUMP00000282599 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SMARCA2-062 | OTTHUMT00000490254.1 | 111 | 37aa | OTTHUMP00000282604 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
SMARCA2-059 | OTTHUMT00000490249.1 | 100 | 3aa | OTTHUMP00000282600 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SMARCA2-060 | OTTHUMT00000490250.1 | 100 | 4aa | OTTHUMP00000282601 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SMARCA2-061 | OTTHUMT00000490251.1 | 100 | 2aa | OTTHUMP00000282602 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SMARCA2-016 | OTTHUMT00000488354.1 | 3681 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
SMARCA2-018 | OTTHUMT00000488356.1 | 2762 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
SMARCA2-020 | OTTHUMT00000488358.1 | 5847 | 1428aa | OTTHUMP00000281408 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A0U1RQZ9 | |
SMARCA2-055 | OTTHUMT00000490262.1 | 1889 | 98aa | OTTHUMP00000282605 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
SMARCA2-009 | OTTHUMT00000051511.2 | 1843 | 98aa | OTTHUMP00000020975 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | B1ALG1 | |
SMARCA2-024 | OTTHUMT00000488368.1 | 1118 | 98aa | OTTHUMP00000281413 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
SMARCA2-039 | OTTHUMT00000488380.1 | 762 | 58aa | OTTHUMP00000281424 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
SMARCA2-046 | OTTHUMT00000488385.1 | 291 | 38aa | OTTHUMP00000281427 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
SMARCA2-052 | OTTHUMT00000490253.1 | 4272 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
SMARCA2-053 | OTTHUMT00000490258.1 | 3211 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
SMARCA2-054 | OTTHUMT00000490261.1 | 2675 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
SMARCA2-021 | OTTHUMT00000488359.1 | 1582 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
SMARCA2-045 | OTTHUMT00000488384.1 | 672 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
SMARCA2-007 | OTTHUMT00000051509.2 | 645 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
SMARCA2-043 | OTTHUMT00000488382.1 | 578 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
SMARCA2-026 | OTTHUMT00000488363.1 | 571 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
SMARCA2-063 | OTTHUMT00000490255.1 | 100 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
SMARCA2-065 | OTTHUMT00000490256.1 | 100 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
SMARCA2-066 | OTTHUMT00000490259.1 | 100 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
SMARCA2-067 | OTTHUMT00000490260.1 | 100 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
SMARCA2-068 | OTTHUMT00000490263.1 | 100 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
SMARCA2-064 | OTTHUMT00000490257.1 | 99 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
SMARCA2-029 | OTTHUMT00000488365.1 | 582 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
SMARCA2-031 | OTTHUMT00000488369.1 | 572 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
SMARCA2-025 | OTTHUMT00000488361.1 | 556 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
SMARCA2-028 | OTTHUMT00000488364.1 | 497 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |