Description
zyxin
Location
Chromosome 7: 143,381,080-143,391,111 forward strand.
VEGA68:CM000669.2
About this gene
This gene has 11 transcripts (splice variants), 16 orthologues and 14 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| ZYX-001 | OTTHUMT00000156296.2 | 2493 | 572aa | OTTHUMP00000081863 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS5883 | Q15942 | |
| ZYX-007 | OTTHUMT00000342164.2 | 2123 | 415aa | OTTHUMP00000208859 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| ZYX-006 | OTTHUMT00000342163.1 | 2050 | 540aa | OTTHUMP00000208858 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0Y2Y8 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| ZYX-003 | OTTHUMT00000156298.2 | 926 | 171aa | OTTHUMP00000081864 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JJK5 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| ZYX-010 | OTTHUMT00000342167.2 | 703 | 164aa | OTTHUMP00000208861 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| ZYX-005 | OTTHUMT00000342162.2 | 533 | 177aa | OTTHUMP00000208857 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| ZYX-011 | OTTHUMT00000342160.1 | 2178 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| ZYX-009 | OTTHUMT00000342166.1 | 632 | 176aa | OTTHUMP00000208860 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| ZYX-008 | OTTHUMT00000342165.1 | 504 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| ZYX-002 | OTTHUMT00000156297.2 | 1146 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ZYX-004 | OTTHUMT00000156299.2 | 560 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
