Description
N-terminal EF-hand calcium binding protein 3
Synonyms
NIP1, dJ63M2.4, dJ63M2.5, EFCBP3, XB51
Location
Chromosome 20: 33,657,087-33,674,463 reverse strand.
VEGA68:CM000682.2
About this gene
This gene has 22 transcripts (splice variants), 2 orthologues and 1 paralogue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| NECAB3-010 | OTTHUMT00000078724.2 | 1989 | 396aa | OTTHUMP00000035342 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS42866 | Q96P71 | |
| NECAB3-003 | OTTHUMT00000078717.1 | 1942 | 362aa | OTTHUMP00000030659 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS42867 | - | |
| NECAB3-016 | OTTHUMT00000078730.2 | 925 | 289aa | OTTHUMP00000030660 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | X6RCW6 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| NECAB3-020 | OTTHUMT00000471424.2 | 900 | 297aa | OTTHUMP00000273804 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | U3KQ06 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| NECAB3-006 | OTTHUMT00000078720.3 | 732 | 125aa | OTTHUMP00000273807 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| NECAB3-005 | OTTHUMT00000078719.2 | 438 | 95aa | OTTHUMP00000273806 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| NECAB3-004 | OTTHUMT00000078718.2 | 2142 | 54aa | OTTHUMP00000273808 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| NECAB3-009 | OTTHUMT00000078723.2 | 1373 | 192aa | OTTHUMP00000273809 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | U3KPZ3 | |
| NECAB3-019 | OTTHUMT00000471425.1 | 969 | 210aa | OTTHUMP00000273805 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | U3KQM7 | |
| NECAB3-012 | OTTHUMT00000078726.2 | 625 | 71aa | OTTHUMP00000273810 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| NECAB3-018 | OTTHUMT00000471415.1 | 2010 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| NECAB3-007 | OTTHUMT00000078721.1 | 1277 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| NECAB3-014 | OTTHUMT00000078728.1 | 1016 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| NECAB3-001 | OTTHUMT00000078715.1 | 859 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| NECAB3-015 | OTTHUMT00000078729.1 | 827 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| NECAB3-013 | OTTHUMT00000078727.1 | 766 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| NECAB3-008 | OTTHUMT00000078722.2 | 597 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| NECAB3-022 | OTTHUMT00000471426.1 | 591 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| NECAB3-002 | OTTHUMT00000078716.1 | 462 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| NECAB3-017 | OTTHUMT00000471416.2 | 1022 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| NECAB3-011 | OTTHUMT00000078725.2 | 596 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| NECAB3-021 | OTTHUMT00000471427.1 | 554 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
