Description
aryl hydrocarbon receptor nuclear translocator
Synonyms
bHLHe2, HIF-1beta
Location
Chromosome 1: 150,809,705-150,876,768 reverse strand.
VEGA68:CM000663.2
About this gene
This gene has 14 transcripts (splice variants) and 2 orthologues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| ARNT-001 | OTTHUMT00000084741.2 | 4887 | 789aa | OTTHUMP00000032943 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS970 | P27540 | |
| ARNT-010 | OTTHUMT00000360630.1 | 3538 | 787aa | OTTHUMP00000218220 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS65642 | - | |
| ARNT-006 | OTTHUMT00000360626.1 | 2892 | 775aa | OTTHUMP00000218217 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS65641 | - | |
| ARNT-009 | OTTHUMT00000360629.1 | 2427 | 774aa | OTTHUMP00000218219 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS971 | - | |
| ARNT-011 | OTTHUMT00000360631.1 | 2542 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| ARNT-008 | OTTHUMT00000360628.1 | 1517 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| ARNT-007 | OTTHUMT00000360627.2 | 3703 | 416aa | OTTHUMP00000218218 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A6NGV6 | |
| ARNT-012 | OTTHUMT00000360632.1 | 571 | 55aa | OTTHUMP00000218221 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| ARNT-005 | OTTHUMT00000084745.1 | 807 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| ARNT-014 | OTTHUMT00000360634.1 | 546 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| ARNT-004 | OTTHUMT00000084744.2 | 597 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ARNT-013 | OTTHUMT00000360633.1 | 570 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ARNT-016 | OTTHUMT00000360636.1 | 562 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ARNT-015 | OTTHUMT00000360635.1 | 550 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
