Description
tropomyosin 3
Synonyms
TRK
Location
Chromosome 1: 154,155,308-154,194,648 reverse strand.
VEGA68:CM000663.2
About this gene
This gene has 25 transcripts (splice variants) and 1 orthologue.
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
TPM3-004 | OTTHUMT00000087274.2 | 3131 | 248aa | OTTHUMP00000034019 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS1060 | - | |
TPM3-009 | OTTHUMT00000087618.1 | 2108 | 248aa | OTTHUMP00000034171 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS41400 | - | |
TPM3-006 | OTTHUMT00000087276.1 | 1771 | 248aa | OTTHUMP00000034021 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS60275 | - | |
TPM3-001 | OTTHUMT00000087271.2 | 1523 | 285aa | OTTHUMP00000034016 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS41403 | P06753 | |
TPM3-026 | OTTHUMT00000360306.1 | 1115 | 247aa | OTTHUMP00000218071 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS41402 | - | |
TPM3-010 | OTTHUMT00000087619.2 | 1088 | 247aa | OTTHUMP00000034172 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS41401 | - | |
TPM3-011 | OTTHUMT00000087620.1 | 741 | 158aa | OTTHUMP00000034173 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS60274 | - | |
TPM3-003 | OTTHUMT00000087273.3 | 2063 | 232aa | OTTHUMP00000034018 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
TPM3-005 | OTTHUMT00000087275.3 | 2007 | 223aa | OTTHUMP00000034020 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
TPM3-015 | OTTHUMT00000360295.1 | 1219 | 285aa | OTTHUMP00000218067 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
TPM3-018 | OTTHUMT00000360298.2 | 587 | 75aa | OTTHUMP00000218069 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
TPM3-002 | OTTHUMT00000087272.2 | 1281 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
TPM3-007 | OTTHUMT00000087616.2 | 1236 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
TPM3-017 | OTTHUMT00000360297.1 | 1221 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
TPM3-016 | OTTHUMT00000360296.1 | 1248 | 49aa | OTTHUMP00000218068 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
TPM3-020 | OTTHUMT00000360300.1 | 543 | 95aa | OTTHUMP00000218070 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
TPM3-008 | OTTHUMT00000087617.1 | 4041 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
TPM3-022 | OTTHUMT00000360302.1 | 750 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
TPM3-019 | OTTHUMT00000360299.1 | 569 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
TPM3-013 | OTTHUMT00000087622.1 | 461 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
TPM3-014 | OTTHUMT00000098992.2 | 2147 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
TPM3-025 | OTTHUMT00000360305.1 | 870 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
TPM3-021 | OTTHUMT00000360301.1 | 746 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
TPM3-023 | OTTHUMT00000360303.1 | 540 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
TPM3-024 | OTTHUMT00000360304.1 | 539 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |