Description
calpain 8
Synonyms
nCL-2
Location
Chromosome 1: 223,538,007-223,665,734 reverse strand.
VEGA68:CM000663.2
About this gene
This gene has 10 transcripts (splice variants), 12 orthologues and 8 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| CAPN8-001 | OTTHUMT00000171394.3 | 2596 | 381aa | OTTHUMP00000096136 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B1B154 | |
| CAPN8-002 | OTTHUMT00000090983.4 | 1399 | 437aa | OTTHUMP00000035499 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B1B153 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CAPN8-004 | OTTHUMT00000171395.2 | 710 | 173aa | OTTHUMP00000231220 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YEJ4 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| CAPN8-005 | OTTHUMT00000171396.4 | 695 | 156aa | OTTHUMP00000096137 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A3QK37 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| CAPN8-007 | OTTHUMT00000171400.1 | 327 | 101aa | OTTHUMP00000096138 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A3QK36 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| CAPN8-003 | OTTHUMT00000090984.3 | 884 | 38aa | OTTHUMP00000231219 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| CAPN8-006 | OTTHUMT00000171399.2 | 364 | 20aa | OTTHUMP00000231258 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| CAPN8-008 | OTTHUMT00000171397.3 | 1023 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CAPN8-009 | OTTHUMT00000386602.1 | 561 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CAPN8-010 | OTTHUMT00000171398.2 | 475 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
