Description
H2A histone family, member Y
Synonyms
macroH2A1.2
Location
Chromosome 5: 135,333,900-135,399,914 reverse strand.
VEGA68:CM000667.2
About this gene
This gene has 20 transcripts (splice variants), 26 orthologues and 25 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| H2AFY-001 | OTTHUMT00000251196.3 | 2789 | 372aa | OTTHUMP00000159413 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS4185 | O75367 | |
| H2AFY-004 | OTTHUMT00000371702.1 | 1881 | 371aa | OTTHUMP00000223175 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS4183 | - | |
| H2AFY-002 | OTTHUMT00000371700.1 | 1859 | 369aa | OTTHUMP00000223174 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS4184 | - | |
| H2AFY-005 | OTTHUMT00000371703.1 | 1314 | 372aa | OTTHUMP00000223176 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS4185 | O75367 | |
| H2AFY-003 | OTTHUMT00000371701.2 | 924 | 200aa | OTTHUMP00000223510 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B4DJC3 | |
| H2AFY-006 | OTTHUMT00000371704.1 | 1905 | 165aa | OTTHUMP00000223177 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | D6RCF2 | |
| H2AFY-009 | OTTHUMT00000371706.1 | 10982 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| H2AFY-008 | OTTHUMT00000371705.1 | 1772 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| H2AFY-010 | OTTHUMT00000371707.1 | 1744 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| H2AFY-015 | OTTHUMT00000371712.1 | 966 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| H2AFY-016 | OTTHUMT00000371713.1 | 775 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| H2AFY-019 | OTTHUMT00000372534.1 | 677 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| H2AFY-021 | OTTHUMT00000372536.1 | 536 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| H2AFY-012 | OTTHUMT00000371709.1 | 293 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| H2AFY-023 | OTTHUMT00000372537.1 | 2769 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| H2AFY-011 | OTTHUMT00000371708.2 | 2521 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| H2AFY-017 | OTTHUMT00000371714.1 | 861 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| H2AFY-014 | OTTHUMT00000371711.1 | 758 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| H2AFY-018 | OTTHUMT00000371715.1 | 501 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| H2AFY-007 | OTTHUMT00000372533.1 | 498 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
