Description
tRNA splicing endonuclease 2 homolog (S. cerevisiae)
Synonyms
SEN2, SEN2L, MGC2776
Location
Chromosome 3: 12,484,432-12,539,623 forward strand.
VEGA68:CM000665.2
About this gene
This gene has 10 transcripts (splice variants), 11 orthologues and 9 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| TSEN2-001 | OTTHUMT00000251981.1 | 2381 | 465aa | OTTHUMP00000160187 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS2611 | Q8NCE0 | |
| TSEN2-006 | OTTHUMT00000339521.1 | 2279 | 439aa | OTTHUMP00000207749 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS46757 | - | |
| TSEN2-002 | OTTHUMT00000339517.1 | 2149 | 465aa | OTTHUMP00000207746 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS2611 | Q8NCE0 | |
| TSEN2-003 | OTTHUMT00000339518.1 | 1909 | 406aa | OTTHUMP00000207747 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS46758 | - | |
| TSEN2-004 | OTTHUMT00000339519.18 | 1239 | 378aa | OTTHUMP00000207748 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9J7Z4 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| TSEN2-008 | OTTHUMT00000339523.3 | 553 | 101aa | OTTHUMP00000209468 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| TSEN2-007 | OTTHUMT00000339522.2 | 784 | 81aa | OTTHUMP00000209407 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H7C301 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| TSEN2-009 | OTTHUMT00000339524.3 | 830 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| TSEN2-005 | OTTHUMT00000339520.1 | 3918 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| TSEN2-010 | OTTHUMT00000339525.1 | 760 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
