Description
COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)
Synonyms
CSN7B
Location
Chromosome 2: 231,781,671-231,809,253 forward strand.
VEGA68:CM000664.2
About this gene
This gene has 23 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| COPS7B-002 | OTTHUMT00000256965.1 | 2563 | 273aa | OTTHUMP00000164301 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS63153 | - | |
| COPS7B-001 | OTTHUMT00000256964.2 | 2544 | 264aa | OTTHUMP00000164300 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS2488 | Q9H9Q2 | |
| COPS7B-014 | OTTHUMT00000331915.1 | 2051 | 278aa | OTTHUMP00000204231 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS77539 | J3KQ41 | |
| COPS7B-015 | OTTHUMT00000331916.1 | 1103 | 264aa | OTTHUMP00000204232 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS2488 | Q9H9Q2 | |
| COPS7B-006 | OTTHUMT00000331907.1 | 1009 | 230aa | OTTHUMP00000204226 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS63152 | J3KQ34 | |
| COPS7B-023 | OTTHUMT00000331924.1 | 806 | 157aa | OTTHUMP00000204237 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS63154 | A0A024R478 | |
| COPS7B-022 | OTTHUMT00000331923.1 | 668 | 172aa | OTTHUMP00000204236 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | J3QT73 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| COPS7B-009 | OTTHUMT00000331910.2 | 571 | 150aa | OTTHUMP00000204227 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | J3QT95 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| COPS7B-004 | OTTHUMT00000331905.1 | 2037 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| COPS7B-003 | OTTHUMT00000331904.1 | 2442 | 62aa | OTTHUMP00000204224 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | J3QT67 | |
| COPS7B-005 | OTTHUMT00000331906.2 | 1935 | 103aa | OTTHUMP00000204225 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | J3QT43 | |
| COPS7B-017 | OTTHUMT00000331918.1 | 978 | 54aa | OTTHUMP00000204233 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | J3KQV6 | |
| COPS7B-018 | OTTHUMT00000331919.1 | 600 | 68aa | OTTHUMP00000204234 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | J3QT69 | |
| COPS7B-012 | OTTHUMT00000331913.1 | 584 | 78aa | OTTHUMP00000204230 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | J3QT50 | |
| COPS7B-011 | OTTHUMT00000331912.1 | 563 | 54aa | OTTHUMP00000204229 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | J3KQV6 | |
| COPS7B-010 | OTTHUMT00000331911.1 | 559 | 62aa | OTTHUMP00000204228 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | J3QT66 | |
| COPS7B-020 | OTTHUMT00000331921.1 | 474 | 49aa | OTTHUMP00000204235 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | J3QT65 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| COPS7B-007 | OTTHUMT00000331908.1 | 3299 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| COPS7B-008 | OTTHUMT00000331909.1 | 2381 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| COPS7B-021 | OTTHUMT00000331922.1 | 914 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| COPS7B-013 | OTTHUMT00000331914.1 | 689 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| COPS7B-019 | OTTHUMT00000331920.1 | 598 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| COPS7B-016 | OTTHUMT00000331917.1 | 550 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
