Description
histone deacetylase 4
Synonyms
HDAC-4, HD4, KIAA0288, HDAC-A, HDACA, HA6116
Location
Chromosome 2: 239,048,168-239,401,654 reverse strand.
VEGA68:CM000664.2
About this gene
This gene has 18 transcripts (splice variants) and 1 orthologue.
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
HDAC4-001 | OTTHUMT00000257174.2 | 8976 | 1084aa | OTTHUMP00000164483 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS2529 | P56524 | |
HDAC4-013 | OTTHUMT00000326234.1 | 578 | 175aa | OTTHUMP00000201680 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H7C397 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
HDAC4-008 | OTTHUMT00000326229.2 | 565 | 162aa | OTTHUMP00000201678 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
HDAC4-007 | OTTHUMT00000326228.2 | 554 | 123aa | OTTHUMP00000201677 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
HDAC4-009 | OTTHUMT00000326230.2 | 445 | 148aa | OTTHUMP00000201679 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
HDAC4-015 | OTTHUMT00000400929.2 | 342 | 29aa | OTTHUMP00000239372 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
HDAC4-003 | OTTHUMT00000326180.2 | 3738 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
HDAC4-017 | OTTHUMT00000404731.1 | 2631 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
HDAC4-018 | OTTHUMT00000404733.1 | 552 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
HDAC4-012 | OTTHUMT00000326233.1 | 451 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
HDAC4-002 | OTTHUMT00000326179.3 | 3188 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
HDAC4-004 | OTTHUMT00000326181.2 | 3158 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
HDAC4-016 | OTTHUMT00000404732.1 | 2743 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
HDAC4-006 | OTTHUMT00000326183.1 | 1019 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
HDAC4-005 | OTTHUMT00000326182.1 | 995 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
HDAC4-010 | OTTHUMT00000326231.1 | 849 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
HDAC4-014 | OTTHUMT00000326235.1 | 819 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
HDAC4-011 | OTTHUMT00000326232.1 | 343 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |