Description
SET domain containing 6
Synonyms
FLJ21148
Location
Chromosome 16: 58,515,479-58,521,181 forward strand.
VEGA68:CM000678.2
About this gene
This gene has 14 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SETD6-001 | OTTHUMT00000317272.2 | 2042 | 449aa | OTTHUMP00000196840 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS10798 | - | |
| SETD6-003 | OTTHUMT00000317274.2 | 1553 | 473aa | OTTHUMP00000196842 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS54013 | Q8TBK2 | |
| SETD6-006 | OTTHUMT00000317277.3 | 3423 | 404aa | OTTHUMP00000196844 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | J3QT10 | |
| SETD6-009 | OTTHUMT00000317280.3 | 576 | 183aa | OTTHUMP00000196845 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SETD6-005 | OTTHUMT00000317276.1 | 4381 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SETD6-002 | OTTHUMT00000317273.2 | 1909 | 262aa | OTTHUMP00000196841 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SETD6-004 | OTTHUMT00000317275.3 | 1739 | 263aa | OTTHUMP00000196843 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SETD6-010 | OTTHUMT00000317281.2 | 829 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SETD6-012 | OTTHUMT00000317283.2 | 1261 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SETD6-011 | OTTHUMT00000317282.1 | 924 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SETD6-008 | OTTHUMT00000317279.2 | 706 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SETD6-007 | OTTHUMT00000317278.2 | 593 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SETD6-014 | OTTHUMT00000317842.1 | 584 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SETD6-013 | OTTHUMT00000317284.1 | 533 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
