Description
polymerase (RNA) II (DNA directed) polypeptide J3
Location
Chromosome 7: 102,537,918-102,572,656 reverse strand.
VEGA68:CM000669.2
About this gene
This gene has 20 transcripts (splice variants), 4 orthologues and 3 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| POLR2J3-020 | OTTHUMT00000480819.2 | 348 | 115aa | OTTHUMP00000278406 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS47673 | A0A0B4J2F8 | |
| POLR2J3-005 | OTTHUMT00000358591.2 | 4630 | 76aa | OTTHUMP00000217200 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7EP90 | |
| POLR2J3-010 | OTTHUMT00000358596.2 | 958 | 274aa | OTTHUMP00000217202 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7EWC6 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| POLR2J3-012 | OTTHUMT00000358598.1 | 546 | 73aa | OTTHUMP00000217204 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RAG0 | |
| POLR2J3-003 | OTTHUMT00000351781.3 | 1598 | 115aa | OTTHUMP00000213586 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | CCDS47673 | A0A0B4J2F8 | |
| POLR2J3-011 | OTTHUMT00000358597.1 | 1030 | 115aa | OTTHUMP00000217203 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | CCDS47673 | A0A0B4J2F8 | |
| POLR2J3-019 | OTTHUMT00000473050.1 | 544 | 115aa | OTTHUMP00000274390 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | CCDS47673 | A0A0B4J2F8 | |
| POLR2J3-001 | OTTHUMT00000351779.3 | 2553 | 158aa | OTTHUMP00000213584 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E2QRJ6 | |
| POLR2J3-002 | OTTHUMT00000351780.2 | 2456 | 128aa | OTTHUMP00000213585 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F8WF84 | |
| POLR2J3-004 | OTTHUMT00000352392.2 | 1532 | 116aa | OTTHUMP00000213583 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A0B4J1Z8 | |
| POLR2J3-009 | OTTHUMT00000358595.1 | 532 | 76aa | OTTHUMP00000217201 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E7EP90 | |
| POLR2J3-006 | OTTHUMT00000358592.1 | 2211 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| POLR2J3-015 | OTTHUMT00000358601.1 | 932 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| POLR2J3-017 | OTTHUMT00000358603.1 | 875 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| POLR2J3-014 | OTTHUMT00000358600.1 | 793 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| POLR2J3-018 | OTTHUMT00000358604.1 | 783 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| POLR2J3-007 | OTTHUMT00000358593.1 | 769 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| POLR2J3-008 | OTTHUMT00000358594.1 | 727 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| POLR2J3-016 | OTTHUMT00000358602.1 | 575 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| POLR2J3-013 | OTTHUMT00000358599.1 | 729 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
