Description
trinucleotide repeat containing 18
Synonyms
CAGL79, KIAA1856, TNRC18A
Location
Chromosome 7: 5,306,790-5,425,414 reverse strand.
VEGA68:CM000669.2
About this gene
This gene has 10 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| TNRC18-001 | OTTHUMT00000324088.6 | 10572 | 2968aa | OTTHUMP00000200617 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H9KVB4 | |
| TNRC18-002 | OTTHUMT00000324087.1 | 1459 | 130aa | OTTHUMP00000200616 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| TNRC18-007 | OTTHUMT00000325408.2 | 1220 | 407aa | OTTHUMP00000201277 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| TNRC18-010 | OTTHUMT00000325410.2 | 925 | 308aa | OTTHUMP00000201279 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| TNRC18-014 | OTTHUMT00000399385.2 | 757 | 252aa | OTTHUMP00000238606 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| TNRC18-009 | OTTHUMT00000325409.3 | 577 | 99aa | OTTHUMP00000201278 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| TNRC18-013 | OTTHUMT00000325413.2 | 577 | 192aa | OTTHUMP00000201280 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| TNRC18-006 | OTTHUMT00000324143.2 | 5223 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| TNRC18-012 | OTTHUMT00000325412.1 | 588 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| TNRC18-011 | OTTHUMT00000325411.1 | 418 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
