Description
transmembrane protein 39A
Synonyms
FLJ10902
Location
Chromosome 3: 119,429,500-119,468,830 reverse strand.
VEGA68:CM000665.2
About this gene
This gene has 12 transcripts (splice variants), 3 orthologues and 1 paralogue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| TMEM39A-002 | OTTHUMT00000354941.3 | 4369 | 488aa | OTTHUMP00000215061 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS2987 | Q9NV64 | |
| TMEM39A-004 | OTTHUMT00000354975.27 | 935 | 191aa | OTTHUMP00000215074 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9IYN1 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| TMEM39A-006 | OTTHUMT00000354977.2 | 852 | 165aa | OTTHUMP00000215076 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9K0C7 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| TMEM39A-003 | OTTHUMT00000354944.28 | 590 | 140aa | OTTHUMP00000215064 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JUZ6 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| TMEM39A-005 | OTTHUMT00000354976.27 | 588 | 112aa | OTTHUMP00000215075 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JYN8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| TMEM39A-001 | OTTHUMT00000354940.3 | 4393 | 146aa | OTTHUMP00000215060 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| TMEM39A-012 | OTTHUMT00000355426.1 | 3043 | 18aa | OTTHUMP00000215361 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| TMEM39A-008 | OTTHUMT00000354991.1 | 868 | 46aa | OTTHUMP00000215082 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| TMEM39A-009 | OTTHUMT00000354992.1 | 826 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| TMEM39A-007 | OTTHUMT00000354978.2 | 554 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| TMEM39A-010 | OTTHUMT00000355004.2 | 885 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| TMEM39A-011 | OTTHUMT00000355006.1 | 575 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
