Description
pleiotropic regulator 1 (PRL1 homolog, Arabidopsis)
Synonyms
PRPF46, Prp46, PRL1, TANGO4, Cwc1
Location
Chromosome 4: 154,535,006-154,550,435 reverse strand.
VEGA68:CM000666.2
About this gene
This gene has 14 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| PLRG1-001 | OTTHUMT00000364824.1 | 3351 | 514aa | OTTHUMP00000220176 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS34083 | O43660 | |
| PLRG1-003 | OTTHUMT00000364826.1 | 1673 | 505aa | OTTHUMP00000220178 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS56341 | - | |
| PLRG1-006 | OTTHUMT00000364829.2 | 723 | 212aa | OTTHUMP00000220180 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RA26 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PLRG1-012 | OTTHUMT00000364835.1 | 365 | 106aa | OTTHUMP00000220181 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PLRG1-015 | OTTHUMT00000364838.2 | 1066 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| PLRG1-013 | OTTHUMT00000364836.1 | 998 | 156aa | OTTHUMP00000220182 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PLRG1-002 | OTTHUMT00000364825.1 | 855 | 131aa | OTTHUMP00000220177 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| PLRG1-004 | OTTHUMT00000364827.1 | 572 | 58aa | OTTHUMP00000220179 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | D6RE04 | |
| PLRG1-007 | OTTHUMT00000364830.1 | 873 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PLRG1-008 | OTTHUMT00000364831.1 | 749 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PLRG1-005 | OTTHUMT00000364828.1 | 576 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PLRG1-011 | OTTHUMT00000364834.1 | 570 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PLRG1-009 | OTTHUMT00000364832.1 | 543 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PLRG1-010 | OTTHUMT00000364833.1 | 522 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
