Description
tumor protein p53
Synonyms
p53, LFS1
Location
Chromosome 17: 7,661,779-7,687,538 reverse strand.
VEGA68:CM000679.2
About this gene
This gene has 29 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| TP53-005 | OTTHUMT00000367401.1 | 2653 | 341aa | OTTHUMP00000221337 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS45606 | - | |
| TP53-025 | OTTHUMT00000476361.1 | 2653 | 302aa | OTTHUMP00000275603 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS73971 | - | |
| TP53-022 | OTTHUMT00000476360.2 | 2639 | 354aa | OTTHUMP00000275602 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS73969 | H2EHT1 | |
| TP53-004 | OTTHUMT00000367400.1 | 2580 | 346aa | OTTHUMP00000221336 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS45605 | - | |
| TP53-027 | OTTHUMT00000476703.1 | 2580 | 307aa | OTTHUMP00000275851 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS73970 | - | |
| TP53-001 | OTTHUMT00000367397.3 | 2579 | 393aa | OTTHUMP00000221333 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS11118 | K7PPA8 | |
| TP53-021 | OTTHUMT00000476359.1 | 2579 | 354aa | OTTHUMP00000275601 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS73969 | H2EHT1 | |
| TP53-002 | OTTHUMT00000367398.2 | 2506 | 393aa | OTTHUMP00000221334 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS11118 | K7PPA8 | |
| TP53-028 | OTTHUMT00000476704.1 | 2506 | 354aa | OTTHUMP00000275852 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS73969 | H2EHT1 | |
| TP53-007 | OTTHUMT00000367403.2 | 2404 | 209aa | OTTHUMP00000275599 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS73968 | - | |
| TP53-024 | OTTHUMT00000476358.1 | 2404 | 182aa | OTTHUMP00000275597 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS73965 | A0A087WXZ1 | |
| TP53-006 | OTTHUMT00000367402.2 | 2331 | 214aa | OTTHUMP00000275598 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS73967 | - | |
| TP53-026 | OTTHUMT00000476702.1 | 2331 | 187aa | OTTHUMP00000275850 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS73964 | A0A087WT22 | |
| TP53-008 | OTTHUMT00000367404.2 | 2271 | 261aa | OTTHUMP00000275600 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS73966 | - | |
| TP53-023 | OTTHUMT00000476357.1 | 2271 | 234aa | OTTHUMP00000275596 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS73963 | A0A087X1Q1 | |
| TP53-019 | OTTHUMT00000440237.1 | 1152 | 343aa | OTTHUMP00000258337 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | J3KP33 | |
| TP53-018 | OTTHUMT00000440236.1 | 1018 | 285aa | OTTHUMP00000258336 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7EQX7 | |
| TP53-015 | OTTHUMT00000367411.2 | 729 | 199aa | OTTHUMP00000221340 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7ESS1 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| TP53-014 | OTTHUMT00000367410.2 | 634 | 165aa | OTTHUMP00000221339 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7EMR6 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| TP53-020 | OTTHUMT00000468199.2 | 568 | 143aa | OTTHUMP00000272508 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | S4R334 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| TP53-003 | OTTHUMT00000367399.2 | 565 | 127aa | OTTHUMP00000221335 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PCY9 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| TP53-013 | OTTHUMT00000367409.2 | 546 | 155aa | OTTHUMP00000221338 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PFT5 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| TP53-017 | OTTHUMT00000440238.1 | 175 | 31aa | OTTHUMP00000258338 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| TP53-010 | OTTHUMT00000367406.1 | 1801 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| TP53-011 | OTTHUMT00000367407.1 | 1675 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| TP53-012 | OTTHUMT00000367408.1 | 1149 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| TP53-029 | OTTHUMT00000488608.1 | 1883 | 410aa | OTTHUMP00000281536 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A0U1RQC9 | |
| TP53-016 | OTTHUMT00000440239.1 | 104 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| TP53-009 | OTTHUMT00000367405.1 | 1261 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
