Description
pleckstrin and Sec7 domain containing 3
Synonyms
EFA6R, DKFZp761K1423, KIAA0942, HCA67, EFA6D
Location
Chromosome 8: 18,527,301-19,084,730 reverse strand.
VEGA68:CM000670.2
About this gene
This gene has 19 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| PSD3-001 | OTTHUMT00000374867.1 | 11689 | 1047aa | OTTHUMP00000224594 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS43720 | - | |
| PSD3-003 | OTTHUMT00000374869.1 | 6665 | 513aa | OTTHUMP00000224595 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS34854 | - | |
| PSD3-002 | OTTHUMT00000374871.1 | 8145 | 982aa | OTTHUMP00000224597 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E5RJ29 | |
| PSD3-006 | OTTHUMT00000374870.1 | 6330 | 376aa | OTTHUMP00000224596 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B4DKF8 | |
| PSD3-010 | OTTHUMT00000374876.1 | 815 | 165aa | OTTHUMP00000224600 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E5RJE4 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PSD3-019 | OTTHUMT00000374884.2 | 627 | 142aa | OTTHUMP00000224603 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PSD3-017 | OTTHUMT00000374875.1 | 610 | 165aa | OTTHUMP00000224599 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YC20 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PSD3-011 | OTTHUMT00000374881.1 | 447 | 119aa | OTTHUMP00000224602 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YAQ7 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PSD3-007 | OTTHUMT00000374868.1 | 6143 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| PSD3-005 | OTTHUMT00000374874.1 | 1605 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| PSD3-004 | OTTHUMT00000374872.1 | 1806 | 167aa | OTTHUMP00000224598 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E5RFG7 | |
| PSD3-012 | OTTHUMT00000374879.1 | 580 | 113aa | OTTHUMP00000224601 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E5RH02 | |
| PSD3-009 | OTTHUMT00000374883.1 | 750 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PSD3-018 | OTTHUMT00000374873.1 | 733 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PSD3-016 | OTTHUMT00000374877.1 | 616 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PSD3-008 | OTTHUMT00000374885.1 | 487 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PSD3-014 | OTTHUMT00000374880.1 | 901 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PSD3-013 | OTTHUMT00000374882.1 | 579 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PSD3-015 | OTTHUMT00000374878.1 | 564 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
