Description
CHK1 checkpoint homolog (S. pombe)
Synonyms
CHK1
Location
Chromosome 11: 125,625,665-125,676,255 forward strand.
VEGA68:CM000673.2
About this gene
This gene has 17 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| CHEK1-004 | OTTHUMT00000386714.2 | 3513 | 476aa | OTTHUMP00000231306 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS8459 | O14757 | |
| CHEK1-002 | OTTHUMT00000386706.2 | 1845 | 476aa | OTTHUMP00000231301 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS8459 | O14757 | |
| CHEK1-007 | OTTHUMT00000386715.1 | 1799 | 476aa | OTTHUMP00000231307 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS8459 | O14757 | |
| CHEK1-001 | OTTHUMT00000386705.2 | 1670 | 492aa | OTTHUMP00000231300 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS81644 | E7EPP6 | |
| CHEK1-005 | OTTHUMT00000386707.2 | 1653 | 382aa | OTTHUMP00000275490 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS81645 | - | |
| CHEK1-006 | OTTHUMT00000386718.1 | 1712 | 432aa | OTTHUMP00000231309 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | J3KN87 | |
| CHEK1-011 | OTTHUMT00000386709.1 | 661 | 204aa | OTTHUMP00000231302 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PKQ3 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CHEK1-013 | OTTHUMT00000386717.3 | 617 | 192aa | OTTHUMP00000231308 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PPA5 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CHEK1-008 | OTTHUMT00000386711.2 | 583 | 127aa | OTTHUMP00000231304 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PQW7 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CHEK1-010 | OTTHUMT00000386710.2 | 562 | 170aa | OTTHUMP00000231303 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PJI4 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CHEK1-009 | OTTHUMT00000386712.3 | 561 | 42aa | OTTHUMP00000231305 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PM65 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CHEK1-012 | OTTHUMT00000386716.4 | 462 | 110aa | OTTHUMP00000275491 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A087WT52 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CHEK1-003 | OTTHUMT00000386713.2 | 2289 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| CHEK1-018 | OTTHUMT00000386704.2 | 769 | 117aa | OTTHUMP00000231299 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| CHEK1-016 | OTTHUMT00000386721.2 | 755 | 89aa | OTTHUMP00000275492 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| CHEK1-015 | OTTHUMT00000386720.1 | 1814 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CHEK1-014 | OTTHUMT00000386719.1 | 772 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
