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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments (2)
- Orthologues (3)
- Alt. alleles
Ontologies
Gene expression
External references
Supporting evidence
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Gene: PMF1 OTTHUMG00000177123

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Description

polyamine-modulated factor 1

Location

Chromosome 1: 156,212,993-156,240,042 forward strand.

VEGA68:CM000663.2

About this gene

This gene has 6 transcripts (splice variants), 3 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
PMF1-001	OTTHUMT00000040860.1	1068	205aa	OTTHUMP00000016581	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS30886	Q6P1K2
PMF1-002	OTTHUMT00000040861.1	1019	180aa	OTTHUMP00000016582	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS55649	-
PMF1-005	OTTHUMT00000040864.2	884	207aa	OTTHUMP00000016584	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS55648	-
PMF1-008	OTTHUMT00000335578.2	933	87aa	OTTHUMP00000273906	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
PMF1-004	OTTHUMT00000040863.2	837	93aa	OTTHUMP00000273907	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
PMF1-010	OTTHUMT00000470404.1	1275	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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