Description
secernin 2
Location
Chromosome 17: 47,837,692-47,841,333 reverse strand.
VEGA68:CM000679.2
About this gene
This gene has 13 transcripts (splice variants), 3 orthologues and 2 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SCRN2-002 | OTTHUMT00000441382.1 | 1779 | 378aa | OTTHUMP00000259042 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS45723 | - | |
| SCRN2-001 | OTTHUMT00000441383.1 | 1548 | 425aa | OTTHUMP00000259043 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS11519 | Q96FV2 | |
| SCRN2-006 | OTTHUMT00000441384.1 | 1745 | 433aa | OTTHUMP00000259044 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | J3QL71 | |
| SCRN2-011 | OTTHUMT00000441386.1 | 932 | 269aa | OTTHUMP00000259046 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SCRN2-013 | OTTHUMT00000441391.2 | 624 | 180aa | OTTHUMP00000259050 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | J3QR84 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SCRN2-004 | OTTHUMT00000441387.1 | 1624 | 127aa | OTTHUMP00000259047 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SCRN2-003 | OTTHUMT00000441385.1 | 1477 | 271aa | OTTHUMP00000259045 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | J3QRJ1 | |
| SCRN2-008 | OTTHUMT00000441388.1 | 952 | 97aa | OTTHUMP00000259048 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SCRN2-010 | OTTHUMT00000441389.1 | 683 | 97aa | OTTHUMP00000259049 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SCRN2-005 | OTTHUMT00000441392.1 | 1237 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SCRN2-009 | OTTHUMT00000441393.1 | 912 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SCRN2-007 | OTTHUMT00000441394.1 | 717 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SCRN2-012 | OTTHUMT00000441390.1 | 550 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
