Description
DEAD (Asp-Glu-Ala-Asp) box polypeptide 42
Synonyms
RHELP, SF3B8, SF3b125, RNAHP
Location
Chromosome 17: 63,773,603-63,819,317 forward strand.
VEGA68:CM000679.2
About this gene
This gene has 18 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| DDX42-001 | OTTHUMT00000444368.1 | 4337 | 938aa | OTTHUMP00000260498 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS32704 | Q86XP3 | |
| DDX42-002 | OTTHUMT00000444369.1 | 4148 | 938aa | OTTHUMP00000260499 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS32704 | Q86XP3 | |
| DDX42-010 | OTTHUMT00000444370.2 | 2783 | 819aa | OTTHUMP00000260500 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| DDX42-009 | OTTHUMT00000444367.2 | 589 | 104aa | OTTHUMP00000260497 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| DDX42-007 | OTTHUMT00000444375.1 | 3277 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| DDX42-006 | OTTHUMT00000444374.2 | 1427 | 99aa | OTTHUMP00000260503 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| DDX42-012 | OTTHUMT00000444372.1 | 857 | 159aa | OTTHUMP00000260501 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| DDX42-013 | OTTHUMT00000444373.1 | 510 | 70aa | OTTHUMP00000260502 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| DDX42-018 | OTTHUMT00000444383.1 | 543 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| DDX42-003 | OTTHUMT00000444378.1 | 3929 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| DDX42-005 | OTTHUMT00000444380.1 | 2919 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| DDX42-008 | OTTHUMT00000444384.1 | 2244 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| DDX42-014 | OTTHUMT00000444376.1 | 594 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| DDX42-016 | OTTHUMT00000444381.1 | 591 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| DDX42-015 | OTTHUMT00000444377.1 | 581 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| DDX42-017 | OTTHUMT00000444382.1 | 571 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| DDX42-011 | OTTHUMT00000444371.1 | 545 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| DDX42-004 | OTTHUMT00000444379.1 | 494 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
