Description
interferon regulatroy factor 3
Location
Chromosome 19: 49,659,569-49,665,875 reverse strand.
VEGA68:CM000681.2
About this gene
This gene has 29 transcripts (splice variants), 7 orthologues and 6 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| IRF3-004 | OTTHUMT00000465962.1 | 1741 | 427aa | OTTHUMP00000271319 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS12775 | Q14653 | |
| IRF3-006 | OTTHUMT00000465957.1 | 1691 | 427aa | OTTHUMP00000271314 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS12775 | Q14653 | |
| IRF3-001 | OTTHUMT00000465961.1 | 1613 | 427aa | OTTHUMP00000271318 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS12775 | Q14653 | |
| IRF3-002 | OTTHUMT00000465960.1 | 1556 | 452aa | OTTHUMP00000271317 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS59409 | - | |
| IRF3-011 | OTTHUMT00000465966.1 | 1494 | 281aa | OTTHUMP00000271322 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS59408 | M0QYT9 | |
| IRF3-010 | OTTHUMT00000465970.1 | 1468 | 281aa | OTTHUMP00000271326 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS59408 | M0QYT9 | |
| IRF3-009 | OTTHUMT00000465969.1 | 1117 | 281aa | OTTHUMP00000271325 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS59408 | M0QYT9 | |
| IRF3-005 | OTTHUMT00000465965.1 | 1055 | 300aa | OTTHUMP00000271321 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS56099 | - | |
| IRF3-012 | OTTHUMT00000465967.1 | 882 | 154aa | OTTHUMP00000271323 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS59407 | - | |
| IRF3-008 | OTTHUMT00000465968.1 | 710 | 154aa | OTTHUMP00000271324 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS59407 | - | |
| IRF3-007 | OTTHUMT00000465958.1 | 1637 | 408aa | OTTHUMP00000271315 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | M0QZB7 | |
| IRF3-028 | OTTHUMT00000465973.2 | 1118 | 287aa | OTTHUMP00000271328 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | M0R205 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| IRF3-025 | OTTHUMT00000465971.2 | 931 | 264aa | OTTHUMP00000271327 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | M0R3C2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| IRF3-022 | OTTHUMT00000465975.2 | 924 | 105aa | OTTHUMP00000271330 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | M0R0X9 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| IRF3-017 | OTTHUMT00000465959.1 | 823 | 135aa | OTTHUMP00000271316 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| IRF3-019 | OTTHUMT00000465980.2 | 768 | 190aa | OTTHUMP00000271333 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | M0QYX3 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| IRF3-023 | OTTHUMT00000465974.2 | 739 | 119aa | OTTHUMP00000271329 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | M0QXC8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| IRF3-020 | OTTHUMT00000465983.2 | 700 | 102aa | OTTHUMP00000271335 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | M0R007 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| IRF3-024 | OTTHUMT00000465976.2 | 680 | 84aa | OTTHUMP00000271331 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | M0R0R8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| IRF3-027 | OTTHUMT00000465977.2 | 633 | 153aa | OTTHUMP00000271332 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | M0R3E9 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| IRF3-003 | OTTHUMT00000465964.1 | 2874 | 329aa | OTTHUMP00000271320 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | M0QZB8 | |
| IRF3-026 | OTTHUMT00000465981.1 | 447 | 71aa | OTTHUMP00000271334 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| IRF3-021 | OTTHUMT00000465956.1 | 472 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| IRF3-018 | OTTHUMT00000465972.1 | 413 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| IRF3-029 | OTTHUMT00000465984.1 | 301 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| IRF3-013 | OTTHUMT00000465979.1 | 800 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| IRF3-016 | OTTHUMT00000465978.1 | 567 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| IRF3-014 | OTTHUMT00000465982.1 | 550 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| IRF3-015 | OTTHUMT00000465963.1 | 550 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
