Description
single stranded DNA binding protein 4
Location
Chromosome 19: 18,418,864-18,434,562 forward strand.
VEGA68:CM000681.2
About this gene
This gene has 15 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SSBP4-002 | OTTHUMT00000466348.3 | 1768 | 385aa | OTTHUMP00000271541 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS12378 | Q9BWG4 | |
| SSBP4-001 | OTTHUMT00000466347.3 | 1721 | 363aa | OTTHUMP00000271540 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS32960 | - | |
| SSBP4-005 | OTTHUMT00000471637.1 | 900 | 206aa | OTTHUMP00000273913 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SSBP4-004 | OTTHUMT00000466344.4 | 865 | 234aa | OTTHUMP00000273722 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | U3KQ46 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SSBP4-013 | OTTHUMT00000466359.2 | 793 | 71aa | OTTHUMP00000274007 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| SSBP4-009 | OTTHUMT00000466351.5 | 622 | 117aa | OTTHUMP00000273726 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SSBP4-006 | OTTHUMT00000466346.4 | 606 | 56aa | OTTHUMP00000273724 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SSBP4-003 | OTTHUMT00000466349.3 | 1301 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SSBP4-007 | OTTHUMT00000466350.3 | 628 | 53aa | OTTHUMP00000271542 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SSBP4-014 | OTTHUMT00000471334.1 | 504 | 54aa | OTTHUMP00000273725 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | U3KQP2 | |
| SSBP4-016 | OTTHUMT00000471792.1 | 747 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SSBP4-008 | OTTHUMT00000466352.3 | 550 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SSBP4-011 | OTTHUMT00000466355.2 | 622 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SSBP4-012 | OTTHUMT00000466356.1 | 492 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SSBP4-015 | OTTHUMT00000466357.2 | 427 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
