Transcript: LRRC47-003 OTTHUMT00000009746.2

Description

leucine rich repeat containing 47

Location

About this transcript

This transcript has 5 exons.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
LRRC47-001	OTTHUMT00000009744.2	4310	583aa	OTTHUMP00000003589	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS51	A0A024R4G1
LRRC47-003	OTTHUMT00000009746.2	434	50aa	OTTHUMP00000262623	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
LRRC47-002	OTTHUMT00000009745.1	575	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 434 bps Translation length: 50 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 27/02/2014 (Created on 14/11/2003)

Alternative symbols

RP1-286D6.3-003

Remarks

novel transcript

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 3,781,290-3,784,047 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000479239

Curation Method

Manual annotation from Havana