Transcript: HFM1-008 OTTHUMT00000027925.1

Description

HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)

Location

Chromosome 1: 91,262,186-91,347,449 reverse strand.

About this transcript

This transcript has 19 exons and is annotated with 5 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000010093 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
HFM1-002	OTTHUMT00000316716.2	4931	1435aa	OTTHUMP00000196537	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS30769	A2PYH4
HFM1-008	OTTHUMT00000027925.1	1928	625aa	OTTHUMP00000011786	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
HFM1-006	OTTHUMT00000316722.2	672	196aa	OTTHUMP00000196542	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
HFM1-007	OTTHUMT00000316723.2	596	138aa	OTTHUMP00000196543	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
HFM1-005	OTTHUMT00000316721.2	540	151aa	OTTHUMP00000196541	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
HFM1-009	OTTHUMT00000027924.1	2667	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
HFM1-004	OTTHUMT00000316720.1	383	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
HFM1-001	OTTHUMT00000027921.4	2020	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
HFM1-003	OTTHUMT00000316719.1	1699	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 19 Transcript length: 1,928 bps Translation length: 625 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 27/02/2014 (Created on 22/01/2004)

Alternative symbols

RP11-509K22.1-008

Remarks

DKFZp686L0198

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 91,262,186-91,347,449 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000430465

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: HFM1-008 OTTHUMT00000027925.1

Summary

Transcript-based displays