Transcript: HIVEP1-003 OTTHUMT00000353827.1

Description

human immunodeficiency virus type I enhancer binding protein 1

Location

Chromosome 6: 12,125,746-12,164,575 forward strand.

About this transcript

This transcript has 4 exons and is annotated with 2 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000014265 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
HIVEP1-001	OTTHUMT00000039870.3	9027	2718aa	OTTHUMP00000016036	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS43426	P15822
HIVEP1-007	OTTHUMT00000353831.1	1602	47aa	OTTHUMP00000214346	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
HIVEP1-002	OTTHUMT00000039871.3	1044	240aa	OTTHUMP00000016037	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9JLG1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
HIVEP1-005	OTTHUMT00000353829.2	585	142aa	OTTHUMP00000214344	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
HIVEP1-004	OTTHUMT00000353828.2	579	120aa	OTTHUMP00000214343	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
HIVEP1-006	OTTHUMT00000353830.2	576	128aa	OTTHUMP00000214345	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
HIVEP1-003	OTTHUMT00000353827.1	2085	43aa	OTTHUMP00000214342	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Summary

Statistics

Exons: 4 Transcript length: 2,085 bps Translation length: 43 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 12/05/2009)

Alternative symbols

RP3-451B15.2-003

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 12,125,746-12,164,575 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000399469

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: HIVEP1-003 OTTHUMT00000353827.1

Summary

Transcript-based displays