Transcript: CAPN11-004 OTTHUMT00000395714.1

Description

calpain 11

Location

About this transcript

This transcript has 5 exons.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
CAPN11-001	OTTHUMT00000040714.3	2728	739aa	OTTHUMP00000016505	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS47436	Q9UMQ6
CAPN11-005	OTTHUMT00000395713.2	585	182aa	OTTHUMP00000236538	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9PQZ4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
CAPN11-004	OTTHUMT00000395714.1	565	40aa	OTTHUMP00000236539	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
CAPN11-002	OTTHUMT00000395715.1	1501	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
CAPN11-003	OTTHUMT00000395716.1	1051	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 565 bps Translation length: 40 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 06/09/2010)

Alternative symbols

RP3-421H19.3-004

Other assemblies

This transcript maps to 44,158,820-44,169,967 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000526118

Curation Method

Manual annotation from Havana