Transcript: SMIM8-005 OTTHUMT00000472486.1

Description

small integral membrane protein 8

Location

Chromosome 6: 87,322,605-87,399,741 forward strand.

About this transcript

This transcript has 8 exons and is annotated with 3 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000015168 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
SMIM8-001	OTTHUMT00000041435.3	2405	97aa	OTTHUMP00000016828	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS34496	Q96KF7
SMIM8-002	OTTHUMT00000472478.1	2111	97aa	OTTHUMP00000274300	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS34496	Q96KF7
SMIM8-003	OTTHUMT00000472479.2	815	97aa	OTTHUMP00000274301	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS34496	Q96KF7
SMIM8-004	OTTHUMT00000472481.1	735	76aa	OTTHUMP00000274302	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS75493	-
SMIM8-005	OTTHUMT00000472486.1	1214	58aa	OTTHUMP00000274309	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
SMIM8-006	OTTHUMT00000472487.2	737	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SMIM8-007	OTTHUMT00000472489.1	3915	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SMIM8-008	OTTHUMT00000041437.2	1568	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 8 Transcript length: 1,214 bps Translation length: 58 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 17/10/2014 (Created on 13/06/2013)

Alternative symbols

RP1-102H19.2-005

Other assemblies

This transcript maps to 87,322,605-87,399,741 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000448282

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: SMIM8-005 OTTHUMT00000472486.1

Summary

Transcript-based displays